Syllabus ( CBRN 514 )
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Basic information
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| Course title: |
Biosurvaillence and Bioremediation |
| Course code: |
CBRN 514 |
| Lecturer: |
Assist. Prof. Yosun MATER
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| ECTS credits: |
7.5 |
| GTU credits: |
3 (3+0+0) |
| Year, Semester: |
1, Fall |
| Level of course: |
Second Cycle (Master's) |
| Type of course: |
Area Elective
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| Language of instruction: |
Turkish
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| Mode of delivery: |
Face to face
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| Pre- and co-requisites: |
none |
| Professional practice: |
No |
| Purpose of the course: |
The objective of the course is to give information on Biosurvaillence and Bioremediation |
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Learning outcomes
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Upon successful completion of this course, students will be able to:
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Obtain basic knowledge of Biology
Contribution to Program Outcomes
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Define, Chemical, Biological, Radiological and Nuclear (cbrn) concepts in a specialized way and apply them in CBRN defense
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Understand relevant research methodologies and techniques and their appropriate application within his/her research field
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Analyze critically and evaluate his/her findings and those of others
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Summarize, document, report and reflect on progress
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Write progress reports clearly on the basis of published documents, thesis, etc
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Question and find out innovative approaches
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Gain original, independent and critical thinking, and develop theoretical concepts and tools
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Work effectively in multi-disciplinary research teams
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Asses risks of natura lor human made CBRN threats
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Develop stragies and/or product in order decicease risks of national and intenational CBRN threats
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Develop an awareness of continuous learning in relation with modern technology
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Find out new methods to improve his/her knowledge
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Effectively express his/her research ideas and findings both orally and in writing
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Support his/her ideas with various arguments and present them clearly to a range of audience, formally and informally through a variety of techniques
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Be aware of issues relating to the rights of other researchers and of research subjects e.g. confidentiality, attribution, copyright, ethics, malpractice, ownership of data
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Understand relevant health and safety issues and demonstrate responsible working practices
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Apply of chemical, biological, radiological and nuclear concepts to individual, social, economic, technological and ethical aspects
Method of assessment
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Written exam
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Seminar/presentation
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Develop an understanding of matter and energy in organisms
Contribution to Program Outcomes
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Define, Chemical, Biological, Radiological and Nuclear (cbrn) concepts in a specialized way and apply them in CBRN defense
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Understand relevant research methodologies and techniques and their appropriate application within his/her research field
-
Analyze critically and evaluate his/her findings and those of others
-
Summarize, document, report and reflect on progress
-
Write progress reports clearly on the basis of published documents, thesis, etc
-
Question and find out innovative approaches
-
Gain original, independent and critical thinking, and develop theoretical concepts and tools
-
Work effectively in multi-disciplinary research teams
-
Asses risks of natura lor human made CBRN threats
-
Develop stragies and/or product in order decicease risks of national and intenational CBRN threats
-
Develop an awareness of continuous learning in relation with modern technology
-
Find out new methods to improve his/her knowledge
-
Effectively express his/her research ideas and findings both orally and in writing
-
Support his/her ideas with various arguments and present them clearly to a range of audience, formally and informally through a variety of techniques
-
Be aware of issues relating to the rights of other researchers and of research subjects e.g. confidentiality, attribution, copyright, ethics, malpractice, ownership of data
-
Understand relevant health and safety issues and demonstrate responsible working practices
-
Apply of chemical, biological, radiological and nuclear concepts to individual, social, economic, technological and ethical aspects
Method of assessment
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Written exam
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Seminar/presentation
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Identify structure-function relationships in cells and organisms
Contribution to Program Outcomes
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Define, Chemical, Biological, Radiological and Nuclear (cbrn) concepts in a specialized way and apply them in CBRN defense
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Understand relevant research methodologies and techniques and their appropriate application within his/her research field
-
Analyze critically and evaluate his/her findings and those of others
-
Summarize, document, report and reflect on progress
-
Write progress reports clearly on the basis of published documents, thesis, etc
-
Question and find out innovative approaches
-
Gain original, independent and critical thinking, and develop theoretical concepts and tools
-
Work effectively in multi-disciplinary research teams
-
Asses risks of natura lor human made CBRN threats
-
Develop stragies and/or product in order decicease risks of national and intenational CBRN threats
-
Develop an awareness of continuous learning in relation with modern technology
-
Find out new methods to improve his/her knowledge
-
Effectively express his/her research ideas and findings both orally and in writing
-
Support his/her ideas with various arguments and present them clearly to a range of audience, formally and informally through a variety of techniques
-
Be aware of issues relating to the rights of other researchers and of research subjects e.g. confidentiality, attribution, copyright, ethics, malpractice, ownership of data
-
Understand relevant health and safety issues and demonstrate responsible working practices
-
Apply of chemical, biological, radiological and nuclear concepts to individual, social, economic, technological and ethical aspects
Method of assessment
-
Written exam
-
Seminar/presentation
-
Find out new methods to improve his/her knowledge
Contribution to Program Outcomes
-
Define, Chemical, Biological, Radiological and Nuclear (cbrn) concepts in a specialized way and apply them in CBRN defense
-
Understand relevant research methodologies and techniques and their appropriate application within his/her research field
-
Analyze critically and evaluate his/her findings and those of others
-
Summarize, document, report and reflect on progress
-
Write progress reports clearly on the basis of published documents, thesis, etc
-
Question and find out innovative approaches
-
Gain original, independent and critical thinking, and develop theoretical concepts and tools
-
Work effectively in multi-disciplinary research teams
-
Asses risks of natura lor human made CBRN threats
-
Develop stragies and/or product in order decicease risks of national and intenational CBRN threats
-
Develop an awareness of continuous learning in relation with modern technology
-
Find out new methods to improve his/her knowledge
-
Effectively express his/her research ideas and findings both orally and in writing
-
Support his/her ideas with various arguments and present them clearly to a range of audience, formally and informally through a variety of techniques
-
Be aware of issues relating to the rights of other researchers and of research subjects e.g. confidentiality, attribution, copyright, ethics, malpractice, ownership of data
-
Understand relevant health and safety issues and demonstrate responsible working practices
-
Apply of chemical, biological, radiological and nuclear concepts to individual, social, economic, technological and ethical aspects
Method of assessment
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Written exam
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Seminar/presentation
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Define the relationship among life forms and their environments and ecosystems
Explain transmission of genetic background in organisms and populations
Develop an understanding of nature and history of scientific thought
Work effectively in multi-disciplinary research teams
Contribution to Program Outcomes
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Define, Chemical, Biological, Radiological and Nuclear (cbrn) concepts in a specialized way and apply them in CBRN defense
-
Understand relevant research methodologies and techniques and their appropriate application within his/her research field
-
Analyze critically and evaluate his/her findings and those of others
-
Summarize, document, report and reflect on progress
-
Write progress reports clearly on the basis of published documents, thesis, etc
-
Question and find out innovative approaches
-
Gain original, independent and critical thinking, and develop theoretical concepts and tools
-
Work effectively in multi-disciplinary research teams
-
Asses risks of natura lor human made CBRN threats
-
Develop stragies and/or product in order decicease risks of national and intenational CBRN threats
-
Develop an awareness of continuous learning in relation with modern technology
-
Find out new methods to improve his/her knowledge
-
Effectively express his/her research ideas and findings both orally and in writing
-
Support his/her ideas with various arguments and present them clearly to a range of audience, formally and informally through a variety of techniques
-
Be aware of issues relating to the rights of other researchers and of research subjects e.g. confidentiality, attribution, copyright, ethics, malpractice, ownership of data
-
Understand relevant health and safety issues and demonstrate responsible working practices
-
Apply of chemical, biological, radiological and nuclear concepts to individual, social, economic, technological and ethical aspects
Method of assessment
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Written exam
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Seminar/presentation
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Find out new methods to improve his/her knowledge
Demonstrate sufficiency in English to follow literature, present technical projects and write articles
Apply biological concepts to personal, social, economical, technological and ethical issues
Demonstrate professional and ethical responsibility
Contribution to Program Outcomes
-
Define, Chemical, Biological, Radiological and Nuclear (cbrn) concepts in a specialized way and apply them in CBRN defense
-
Understand relevant research methodologies and techniques and their appropriate application within his/her research field
-
Analyze critically and evaluate his/her findings and those of others
-
Summarize, document, report and reflect on progress
-
Write progress reports clearly on the basis of published documents, thesis, etc
-
Question and find out innovative approaches
-
Gain original, independent and critical thinking, and develop theoretical concepts and tools
-
Work effectively in multi-disciplinary research teams
-
Asses risks of natura lor human made CBRN threats
-
Develop stragies and/or product in order decicease risks of national and intenational CBRN threats
-
Develop an awareness of continuous learning in relation with modern technology
-
Find out new methods to improve his/her knowledge
-
Effectively express his/her research ideas and findings both orally and in writing
-
Support his/her ideas with various arguments and present them clearly to a range of audience, formally and informally through a variety of techniques
-
Be aware of issues relating to the rights of other researchers and of research subjects e.g. confidentiality, attribution, copyright, ethics, malpractice, ownership of data
-
Understand relevant health and safety issues and demonstrate responsible working practices
-
Apply of chemical, biological, radiological and nuclear concepts to individual, social, economic, technological and ethical aspects
Method of assessment
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Written exam
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Seminar/presentation
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Contents
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| Week 1: |
Biosecurity, biological defense and causes |
| Week 2: |
Recognition of biological threat |
| Week 3: |
Diseases and agents |
| Week 4: |
Recognition, prevention, exclusion and reporting |
| Week 5: |
Sustainability and bioremediation elements |
| Week 6: |
Biochemical cycle |
| Week 7: |
Phytoremediation: an effective approach to organic and metallic ion pollutants |
| Week 8: |
Mid-term exam |
| Week 9: |
Bioleaching |
| Week 10: |
Biosorption of heavy metals |
| Week 11: |
Biofiltration: Water and food-borne pathogens |
| Week 12: |
Wastewater treatment and disinfection |
| Week 13: |
Bioremediation of Xenobiotics |
| Week 14: |
Articles Review for Subject |
| Week 15*: |
General Concluding Remarks of Course |
| Week 16*: |
Final Exam |
| Textbooks and materials: |
1. Biosecurity and Bioterrorism; Jeffrey R. Ryan; 2016; Butterworth-Heinemann 2. Bioremediation and Sustainability: Research and Applications; Romeela Mohee; 2012; John Wiley and Sons 3. Environmental Microbiology; Ian L. Pepper, Charles P. Gerba, Terry J. Gentry; 3rd. Ed.; 2014; Academic Press. 4. Weapons of Mass Destruction: An Encyclopedia of Worldwide Policy, Technology, and History; Volume I: Chemical and Biological Weapons and Volume II: Technology, and History (2 volume set); Eric A. Croddy, James J. Wirtz, Jeffrey A. Larsen; 2005; ABC-CLIO Inc |
| Recommended readings: |
2. Bioremediation and Sustainability: Research and Applications; Romeela Mohee; 2012; John Wiley and Sons 3. Environmental Microbiology; Ian L. Pepper, Charles P. Gerba, Terry J. Gentry; 3rd. Ed.; 2014; Academic Press. 4. Weapons of Mass Destruction: An Encyclopedia of Worldwide Policy, Technology, and History; Volume I: Chemical and Biological Weapons and Volume II: Technology, and History (2 volume set); Eric A. Croddy, James J. Wirtz, Jeffrey A. Larsen; 2005; ABC-CLIO Inc |
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* Between 15th and 16th weeks is there a free week for students to prepare for final exam.
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Assessment
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| Method of assessment |
Week number |
Weight (%) |
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| Mid-terms: |
8 |
30 |
| Other in-term studies: |
1-16 |
20 |
| Project: |
0 |
0 |
| Homework: |
0 |
0 |
| Quiz: |
0 |
0 |
| Final exam: |
16 |
50 |
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Total weight: |
(%) |
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Workload
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| Activity |
Duration (Hours per week) |
Total number of weeks |
Total hours in term |
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| Courses (Face-to-face teaching): |
3 |
16 |
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| Own studies outside class: |
4 |
14 |
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| Practice, Recitation: |
0 |
0 |
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| Homework: |
0 |
0 |
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| Term project: |
0 |
0 |
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| Term project presentation: |
0 |
0 |
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| Quiz: |
0 |
0 |
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| Own study for mid-term exam: |
5 |
12 |
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| Mid-term: |
2 |
1 |
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| Personal studies for final exam: |
5 |
3 |
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| Final exam: |
2 |
1 |
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Total workload: |
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Total ECTS credits: |
* |
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* ECTS credit is calculated by dividing total workload by 25. (1 ECTS = 25 work hours)
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